Collagen, type XXV, alpha 1

Collagen alpha-1(XXV) chain is a protein that in humans is encoded by the COL25A1 gene.[5][6]

COL25A1
Identifiers
AliasesCOL25A1, AMY, CLAC, CLAC-P, CLACP, CFEOM5, Collagen, type XXV, alpha 1, collagen type XXV alpha 1, collagen type XXV alpha 1 chain
External IDsOMIM: 610004 MGI: 1924268 HomoloGene: 57111 GeneCards: COL25A1
Gene location (Human)
Chr.Chromosome 4 (human)[1]
Band4q25Start108,808,725 bp[1]
End109,302,752 bp[1]
Orthologs
SpeciesHumanMouse
Entrez

84570

77018

Ensembl

ENSG00000188517

ENSMUSG00000058897

UniProt

Q9BXS0

Q99MQ5

RefSeq (mRNA)

NM_001256074
NM_032518
NM_198721

NM_001244952
NM_029838
NM_198711

RefSeq (protein)

NP_001243003
NP_115907
NP_942014

NP_001231881
NP_084114
NP_942004

Location (UCSC)Chr 4: 108.81 – 109.3 MbChr 3: 130.13 – 130.6 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

COL25A1 is a brain-specific membrane-bound collagen. Proteolytic processing releases CLAC, a soluble form of COL25A1 containing the extracellular collagen domains that associates with senile plaques in Alzheimer disease (AD; MIM 104300) brains (Osada et al., 2005).[supplied by OMIM][6]

Interactions

Collagen, type XXV, alpha 1 has been shown to interact with Amyloid precursor protein.[5]

References

  1. GRCh38: Ensembl release 89: ENSG00000188517 - Ensembl, May 2017
  2. GRCm38: Ensembl release 89: ENSMUSG00000058897 - Ensembl, May 2017
  3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. Hashimoto T, Wakabayashi T, Watanabe A, Kowa H, Hosoda R, Nakamura A, Kanazawa I, Arai T, Takio K, Mann DM, Iwatsubo T (Apr 2002). "CLAC: a novel Alzheimer amyloid plaque component derived from a transmembrane precursor, CLAC-P/collagen type XXV". EMBO J. 21 (7): 1524–34. doi:10.1093/emboj/21.7.1524. PMC 125364. PMID 11927537.
  6. "Entrez Gene: COL25A1 collagen, type XXV, alpha 1".

Further reading


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