U12 intron database

U12DB
Content
Description	orthologous U12-type spliceosomal introns.
Contact
Authors	Tyler S Alioto
Primary citation	Alioto & al. (2007)[1]
Release date	2006
Access
Website	http://genome.imim.es/cgi-bin/u12db/u12db.cgi

U12 Intron Database (U12DB) is a biological database of containing the sequence of eukaryotic introns that are spliced out by a specialised minor spliceosome that contains U12 minor spliceosomal RNA in place of U2 spliceosomal RNA.^[1] These U12-dependent introns are under-represented in genome annotations because they often have non canonical splice sites. Release 1 of the database contains 6,397 known and predicted U12-dependent introns across 20 species.

References

1 2 Alioto, Tyler S (Jan 2007). "U12DB: a database of orthologous U12-type spliceosomal introns". Nucleic Acids Res. England. 35 (Database issue): D110–5. doi:10.1093/nar/gkl796. PMC 1635337. PMID 17082203.

External links

http://genome.imim.es/cgi-bin/u12db/u12db.cgi

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[pmid17082203-1] 1 2 Alioto, Tyler S (Jan 2007). "U12DB: a database of orthologous U12-type spliceosomal introns". Nucleic Acids Res. England. 35 (Database issue): D110–5. doi:10.1093/nar/gkl796. PMC 1635337. PMID 17082203.