FAU (gene)

FAU
Available structures
PDBOrtholog search: PDBe RCSB
Identifiers
AliasesFAU, FAU1, Fub1, Fubi, MNSFbeta, RPS30, S30, asr1, Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed, ubiquitin like and ribosomal protein S30 fusion
External IDsMGI: 102547 HomoloGene: 37562 GeneCards: FAU
Gene location (Human)
Chr.Chromosome 11 (human)[1]
Band11q13.1Start65,120,628 bp[1]
End65,122,473 bp[1]
Orthologs
SpeciesHumanMouse
Entrez

2197

14109

Ensembl

ENSG00000149806

ENSMUSG00000038274

UniProt

P35544
P62861

P35545
P62862

RefSeq (mRNA)

NM_001997

NM_001160239
NM_001190436
NM_007990

RefSeq (protein)

NP_001988

NP_001153711
NP_001177365
NP_032016

Location (UCSC)Chr 11: 65.12 – 65.12 MbChr 19: 6.06 – 6.06 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

40S ribosomal protein S30 is a protein that in humans is encoded by the FAU gene.[5][6]

Function

This gene is the cellular homolog of the fox sequence in the Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV). It encodes a fusion protein consisting of the ubiquitin-like protein fubi at the N-terminus and ribosomal protein S30 at the C-terminus. It has been proposed that the fusion protein is post-translationally processed to generate free fubi and free ribosomal protein S30. Fubi is a member of the ubiquitin family, and ribosomal protein S30 belongs to the S30E family of ribosomal proteins. Whereas the function of fubi is currently unknown, ribosomal protein S30 is a component of the 40S subunit of the cytoplasmic ribosome. Pseudogenes derived from this gene are present in the genome. Similar to ribosomal protein S30, ribosomal proteins S27a and L40 are synthesized as fusion proteins with ubiquitin.[6]

References

  1. 1 2 3 GRCh38: Ensembl release 89: ENSG00000149806 - Ensembl, May 2017
  2. 1 2 3 GRCm38: Ensembl release 89: ENSMUSG00000038274 - Ensembl, May 2017
  3. ↑ "Human PubMed Reference:".
  4. ↑ "Mouse PubMed Reference:".
  5. ↑ Kas K, Schoenmakers E, van de Ven W, Weber G, Nordenskjold M, Michiels L, Merregaert J, Larsson C (Oct 1993). "Assignment of the human FAU gene to a subregion of chromosome 11q13". Genomics. 17 (2): 387–92. doi:10.1006/geno.1993.1337. PMID 8406491.
  6. 1 2 "Entrez Gene: FAU Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived); ribosomal protein S30".

Further reading

  • Wool IG, Chan YL, Glück A (1996). "Structure and evolution of mammalian ribosomal proteins". Biochem. Cell Biol. 73 (11–12): 933–47. doi:10.1139/o95-101. PMID 8722009.
  • Kas K, Michiels L, Merregaert J (1992). "Genomic structure and expression of the human fau gene: encoding the ribosomal protein S30 fused to a ubiquitin-like protein". Biochem. Biophys. Res. Commun. 187 (2): 927–33. doi:10.1016/0006-291X(92)91286-Y. PMID 1326960.
  • Kato S, Sekine S, Oh SW, et al. (1995). "Construction of a human full-length cDNA bank". Gene. 150 (2): 243–50. doi:10.1016/0378-1119(94)90433-2. PMID 7821789.
  • Michiels L, Van der Rauwelaert E, Van Hasselt F, et al. (1993). "fau cDNA encodes a ubiquitin-like-S30 fusion protein and is expressed as an antisense sequence in the Finkel-Biskis-Reilly murine sarcoma virus". Oncogene. 8 (9): 2537–46. PMID 8395683.
  • Vladimirov SN, Ivanov AV, Karpova GG, et al. (1996). "Characterization of the human small-ribosomal-subunit proteins by N-terminal and internal sequencing, and mass spectrometry". Eur. J. Biochem. 239 (1): 144–9. doi:10.1111/j.1432-1033.1996.0144u.x. PMID 8706699.
  • Kenmochi N, Kawaguchi T, Rozen S, et al. (1998). "A map of 75 human ribosomal protein genes". Genome Res. 8 (5): 509–23. doi:10.1101/gr.8.5.509. PMID 9582194.
  • Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. doi:10.1073/pnas.242603899. PMC 139241. PMID 12477932.
  • Rossman TG, Visalli MA, Komissarova EV (2003). "fau and its ubiquitin-like domain (FUBI) transforms human osteogenic sarcoma (HOS) cells to anchorage-independence". Oncogene. 22 (12): 1817–21. doi:10.1038/sj.onc.1206283. PMID 12660817.
  • Ota T, Suzuki Y, Nishikawa T, et al. (2004). "Complete sequencing and characterization of 21,243 full-length human cDNAs". Nat. Genet. 36 (1): 40–5. doi:10.1038/ng1285. PMID 14702039.
  • Suzuki Y, Yamashita R, Shirota M, et al. (2004). "Sequence comparison of human and mouse genes reveals a homologous block structure in the promoter regions". Genome Res. 14 (9): 1711–8. doi:10.1101/gr.2435604. PMC 515316. PMID 15342556.
  • Gerhard DS, Wagner L, Feingold EA, et al. (2004). "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)". Genome Res. 14 (10B): 2121–7. doi:10.1101/gr.2596504. PMC 528928. PMID 15489334.
  • Mourtada-Maarabouni M, Kirkham L, Farzaneh F, Williams GT (2005). "Regulation of apoptosis by fau revealed by functional expression cloning and antisense expression". Oncogene. 23 (58): 9419–26. doi:10.1038/sj.onc.1208048. PMID 15543234.
  • Andersen JS, Lam YW, Leung AK, et al. (2005). "Nucleolar proteome dynamics". Nature. 433 (7021): 77–83. doi:10.1038/nature03207. PMID 15635413.
  • Yu Y, Ji H, Doudna JA, Leary JA (2005). "Mass spectrometric analysis of the human 40S ribosomal subunit: native and HCV IRES-bound complexes". Protein Sci. 14 (6): 1438–46. doi:10.1110/ps.041293005. PMC 2253395. PMID 15883184.


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