UBXD5

UBXN11
Identifiers
AliasesUBXN11, COA-1, SOC, SOCI, UBXD5, PP2243, UBX domain protein 11
External IDsMGI: 1914836 HomoloGene: 12159 GeneCards: UBXN11
Gene location (Human)
Chr.Chromosome 1 (human)[1]
Band1p36.11Start26,281,328 bp[1]
End26,318,363 bp[1]
Orthologs
SpeciesHumanMouse
Entrez

91544

67586

Ensembl

ENSG00000158062

ENSMUSG00000012126

UniProt

Q5T124

Q9D572

RefSeq (mRNA)

NM_183008
NM_001077262
NM_145345

NM_026257

RefSeq (protein)

NP_001070730
NP_663320
NP_892120

NP_080533

Location (UCSC)Chr 1: 26.28 – 26.32 MbChr 4: 134.1 – 134.13 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

UBX domain-containing protein 11 is a protein that in humans is encoded by the UBXN11 gene.[5][6]

Function

This gene encodes a protein with a divergent C-terminal UBX domain. The homologous protein in the rat interacts with members of the Rnd subfamily of Rho GTPases at the cell periphery through its C-terminal region. It also interacts with several heterotrimeric G proteins through their G-alpha subunits and promotes Rho GTPase activation. It is proposed to serve a bidirectional role in the promotion and inhibition of Rho activity through upstream signaling pathways. The 3' coding sequence of this gene contains a polymoprhic region of 24 nt tandem repeats. Several transcripts containing between 1.5 and five repeat units have been reported. Multiple transcript variants encoding different isoforms have been found for this gene.[6]

Interactions

UBXD5 has been shown to interact with Rnd1,[5] Rnd2[5] and Rnd3.[5]

References

  1. 1 2 3 GRCh38: Ensembl release 89: ENSG00000158062 - Ensembl, May 2017
  2. 1 2 3 GRCm38: Ensembl release 89: ENSMUSG00000012126 - Ensembl, May 2017
  3. ↑ "Human PubMed Reference:".
  4. ↑ "Mouse PubMed Reference:".
  5. 1 2 3 4 Katoh H, Harada A, Mori K, Negishi M (Apr 2002). "Socius is a novel Rnd GTPase-interacting protein involved in disassembly of actin stress fibers". Mol. Cell. Biol. 22 (9): 2952–64. doi:10.1128/MCB.22.9.2952-2964.2002. PMC 133765. PMID 11940653.
  6. 1 2 "Entrez Gene: UBXD5 UBX domain containing 5".

Further reading

  • Andersson B, Wentland MA, Ricafrente JY, Liu W, Gibbs RA (1996). "A "double adaptor" method for improved shotgun library construction". Anal. Biochem. 236 (1): 107–13. doi:10.1006/abio.1996.0138. PMID 8619474.
  • Yu W, Andersson B, Worley KC, Muzny DM, Ding Y, Liu W, Ricafrente JY, Wentland MA, Lennon G, Gibbs RA (1997). "Large-scale concatenation cDNA sequencing". Genome Res. 7 (4): 353–8. doi:10.1101/gr.7.4.353. PMC 139146. PMID 9110174.
  • Maccalli C, Li YF, El-Gamil M, Rosenberg SA, Robbins PF (2003). "Identification of a colorectal tumor-associated antigen (COA-1) recognized by CD4(+) T lymphocytes". Cancer Res. 63 (20): 6735–43. PMC 2275323. PMID 14583468.
  • Colland F, Jacq X, Trouplin V, Mougin C, Groizeleau C, Hamburger A, Meil A, Wojcik J, Legrain P, Gauthier JM (2004). "Functional proteomics mapping of a human signaling pathway". Genome Res. 14 (7): 1324–32. doi:10.1101/gr.2334104. PMC 442148. PMID 15231748.
  • Rual JF, Venkatesan K, Hao T, Hirozane-Kishikawa T, Dricot A, Li N, Berriz GF, Gibbons FD, Dreze M, Ayivi-Guedehoussou N, Klitgord N, Simon C, Boxem M, Milstein S, Rosenberg J, Goldberg DS, Zhang LV, Wong SL, Franklin G, Li S, Albala JS, Lim J, Fraughton C, Llamosas E, Cevik S, Bex C, Lamesch P, Sikorski RS, Vandenhaute J, Zoghbi HY, Smolyar A, Bosak S, Sequerra R, Doucette-Stamm L, Cusick ME, Hill DE, Roth FP, Vidal M (2005). "Towards a proteome-scale map of the human protein-protein interaction network". Nature. 437 (7062): 1173–8. doi:10.1038/nature04209. PMID 16189514.
  • Tateiwa K, Katoh H, Negishi M (2005). "Socius, a novel binding partner of Galpha12/13, promotes the Galpha12-induced RhoA activation". Biochem. Biophys. Res. Commun. 337 (2): 615–20. doi:10.1016/j.bbrc.2005.09.097. PMID 16202387.
  • Kimura K, Wakamatsu A, Suzuki Y, Ota T, Nishikawa T, Yamashita R, Yamamoto J, Sekine M, Tsuritani K, Wakaguri H, Ishii S, Sugiyama T, Saito K, Isono Y, Irie R, Kushida N, Yoneyama T, Otsuka R, Kanda K, Yokoi T, Kondo H, Wagatsuma M, Murakawa K, Ishida S, Ishibashi T, Takahashi-Fujii A, Tanase T, Nagai K, Kikuchi H, Nakai K, Isogai T, Sugano S (2006). "Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes". Genome Res. 16 (1): 55–65. doi:10.1101/gr.4039406. PMC 1356129. PMID 16344560.


This article is issued from Wikipedia. The text is licensed under Creative Commons - Attribution - Sharealike. Additional terms may apply for the media files.