TAF4B

TAF4B
Available structures
PDB	Ortholog search: PDBe RCSB
List of PDB id codes
	1H3O, 2P6V
Identifiers
Aliases	TAF4B, SPGF13, TAF2C2, TAFII105, TATA-box binding protein associated factor 4b
External IDs	MGI: 2152345 HomoloGene: 28266 GeneCards: TAF4B
Gene location (Human)
Chr.	Chromosome 18 (human)[1]
End	26,391,685 bp[1]
Gene location (Mouse)
Chr.	Chromosome 18 (mouse)[2]
End	14,900,359 bp[2]
RNA expression pattern
	More reference expression data
Gene ontology
Molecular function	• transcription factor activity, sequence-specific DNA binding; • DNA binding; • NF-kappaB binding; • protein heterodimerization activity; • transcription factor activity, RNA polymerase II core promoter sequence-specific binding involved in preinitiation complex assembly; • transcription coactivator activity; • transcription factor binding;
Cellular component	• cytoplasm; • cell nucleus; • nucleoplasm; • fibrillar center; • transcription factor TFIID complex;
Biological process	• DNA-templated transcription, initiation; • cell differentiation; • transcription initiation from RNA polymerase II promoter; • regulation of transcription, DNA-templated; • transcription from RNA polymerase II promoter; • spermatogenesis; • transcription, DNA-templated; • oogenesis; • regulation of signal transduction by p53 class mediator; • positive regulation of transcription from RNA polymerase II promoter; • RNA polymerase II transcriptional preinitiation complex assembly;
	Sources:Amigo / QuickGO
Orthologs
	6875
	72504
	ENSG00000141384
	ENSMUSG00000054321
	Q92750
	G5E8Z2
	NM_001293725; NM_005640
	NM_001100449
	NP_001280654; NP_005631
	NP_001093919
	Wikidata
View/Edit Human	View/Edit Mouse

Transcription initiation factor TFIID subunit 4B is a protein that in humans is encoded by the TAF4B gene.^[5]^[6]^[7]

Function

TATA-binding protein associated factors (TAFs) participate, with TATA binding protein (TBP; MIM 600075), in the formation of the TFIID protein complex (see MIM 313650), which is involved in the initiation of gene transcription by RNA polymerase II (see MIM 180660).[supplied by OMIM]^[7]

Interactions

TAF4B has been shown to interact with RELA.^[8]

References

1 2 3 GRCh38: Ensembl release 89: ENSG00000141384 - Ensembl, May 2017
1 2 3 GRCm38: Ensembl release 89: ENSMUSG00000054321 - Ensembl, May 2017
↑ "Human PubMed Reference:".
↑ "Mouse PubMed Reference:".
↑ Dikstein R, Zhou S, Tjian R (Nov 1996). "Human TAFII 105 is a cell type-specific TFIID subunit related to hTAFII130". Cell. 87 (1): 137–46. doi:10.1016/S0092-8674(00)81330-6. PMID 8858156.
↑ Yamit-Hezi A, Nir S, Wolstein O, Dikstein R (Jul 2000). "Interaction of TAFII105 with selected p65/RelA dimers is associated with activation of subset of NF-kappa B genes". J. Biol. Chem. 275 (24): 18180–7. doi:10.1074/jbc.275.24.18180. PMID 10849440.
1 2 "Entrez Gene: TAF4B TAF4b RNA polymerase II, TATA box binding protein (TBP)-associated factor, 105kDa".
↑ Yamit-Hezi A, Dikstein R (Sep 1998). "TAFII105 mediates activation of anti-apoptotic genes by NF-kappaB". EMBO J. 17 (17): 5161–9. doi:10.1093/emboj/17.17.5161. PMC 1170844. PMID 9724652.

Liu WL, Coleman RA, Grob P, King DS, Florens L, Washburn MP, Geles KG, Yang JL, Ramey V, Nogales E, Tjian R (2008). "Structural changes in TAF4b-TFIID correlate with promoter selectivity". Mol. Cell. 29 (1): 81–91. doi:10.1016/j.molcel.2007.11.003. PMC 2486835. PMID 18206971.
Wu Y, Lu Y, Hu Y, Li R (2005). "Cyclic AMP-dependent modification of gonad-selective TAF(II)105 in a human ovarian granulosa cell line". J. Cell. Biochem. 96 (4): 751–9. doi:10.1002/jcb.20577. PMID 16088961.
Shao H, Revach M, Moshonov S, Tzuman Y, Gazit K, Albeck S, Unger T, Dikstein R (2005). "Core promoter binding by histone-like TAF complexes". Mol. Cell. Biol. 25 (1): 206–19. doi:10.1128/MCB.25.1.206-219.2005. PMC 538770. PMID 15601843.
Rashevsky-Finkel A, Silkov A, Dikstein R (2001). "A composite nuclear export signal in the TBP-associated factor TAFII105". J. Biol. Chem. 276 (48): 44963–9. doi:10.1074/jbc.M106112200. PMID 11567023.
Wolstein O, Silkov A, Revach M, Dikstein R (2000). "Specific interaction of TAFII105 with OCA-B is involved in activation of octamer-dependent transcription". J. Biol. Chem. 275 (22): 16459–65. doi:10.1074/jbc.275.22.16459. PMID 10828057.
Yamit-Hezi A, Dikstein R (1998). "TAFII105 mediates activation of anti-apoptotic genes by NF-kappaB". EMBO J. 17 (17): 5161–9. doi:10.1093/emboj/17.17.5161. PMC 1170844. PMID 9724652.

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[refGRCh38Ensembl-1] 1 2 3 GRCh38: Ensembl release 89: ENSG00000141384 - Ensembl, May 2017

[refGRCm38Ensembl-2] 1 2 3 GRCm38: Ensembl release 89: ENSMUSG00000054321 - Ensembl, May 2017

[3] "Human PubMed Reference:".

[4] "Mouse PubMed Reference:".

[pmid8858156-5] Dikstein R, Zhou S, Tjian R (Nov 1996). "Human TAFII 105 is a cell type-specific TFIID subunit related to hTAFII130". Cell. 87 (1): 137–46. doi:10.1016/S0092-8674(00)81330-6. PMID 8858156.

[pmid10849440-6] Yamit-Hezi A, Nir S, Wolstein O, Dikstein R (Jul 2000). "Interaction of TAFII105 with selected p65/RelA dimers is associated with activation of subset of NF-kappa B genes". J. Biol. Chem. 275 (24): 18180–7. doi:10.1074/jbc.275.24.18180. PMID 10849440.

[entrez-7] 1 2 "Entrez Gene: TAF4B TAF4b RNA polymerase II, TATA box binding protein (TBP)-associated factor, 105kDa".

[pmid9724652-8] Yamit-Hezi A, Dikstein R (Sep 1998). "TAFII105 mediates activation of anti-apoptotic genes by NF-kappaB". EMBO J. 17 (17): 5161–9. doi:10.1093/emboj/17.17.5161. PMC 1170844. PMID 9724652.

TAF4B

Function

Interactions

References

Further reading