HPS3

HPS3
Identifiers
AliasesHPS3, SUTAL, BLOC2S1, biogenesis of lysosomal organelles complex 2 subunit 1
External IDsMGI: 2153839 HomoloGene: 13019 GeneCards: HPS3
Gene location (Human)
Chr.Chromosome 3 (human)[1]
Band3q24Start149,129,584 bp[1]
End149,173,732 bp[1]
RNA expression pattern


More reference expression data
Orthologs
SpeciesHumanMouse
Entrez

84343

12807

Ensembl

ENSG00000163755

ENSMUSG00000027615

UniProt

Q969F9

Q91VB4

RefSeq (mRNA)

NM_001308258
NM_032383

NM_001146323
NM_001146324
NM_080634

RefSeq (protein)

NP_001295187
NP_115759

NP_001139795
NP_001139796
NP_542365

Location (UCSC)Chr 3: 149.13 – 149.17 MbChr 3: 20 – 20.04 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Hermansky-Pudlak syndrome 3 protein is a protein that in humans is encoded by the HPS3 gene.[5][6]

This gene encodes a protein containing a potential clathrin-binding motif, consensus dileucine signals, and tyrosine-based sorting signals for targeting to vesicles of lysosomal lineage. The encoded protein may play a role in organelle biogenesis associated with melanosomes, platelet dense granules, and lysosomes. Mutations in this gene are associated with Hermansky-Pudlak syndrome type 3. Alternate splice variants exist, but their full length sequence has not been determined.[6]

References

  1. 1 2 3 GRCh38: Ensembl release 89: ENSG00000163755 - Ensembl, May 2017
  2. 1 2 3 GRCm38: Ensembl release 89: ENSMUSG00000027615 - Ensembl, May 2017
  3. ↑ "Human PubMed Reference:".
  4. ↑ "Mouse PubMed Reference:".
  5. ↑ Anikster Y, Huizing M, White J, Shevchenko YO, Fitzpatrick DL, Touchman JW, Compton JG, Bale SJ, Swank RT, Gahl WA, Toro JR (Jul 2001). "Mutation of a new gene causes a unique form of Hermansky-Pudlak syndrome in a genetic isolate of central Puerto Rico". Nat Genet. 28 (4): 376–80. doi:10.1038/ng576. PMID 11455388.
  6. 1 2 "Entrez Gene: HPS3 Hermansky-Pudlak syndrome 3".

Further reading

  • Huizing M, Gahl WA (2003). "Disorders of vesicles of lysosomal lineage: the Hermansky-Pudlak syndromes". Curr. Mol. Med. 2 (5): 451–67. doi:10.2174/1566524023362357. PMID 12125811.
  • Oh J, Ho L, Ala-Mello S, et al. (1998). "Mutation analysis of patients with Hermansky-Pudlak syndrome: a frameshift hot spot in the HPS gene and apparent locus heterogeneity". Am. J. Hum. Genet. 62 (3): 593–8. doi:10.1086/301757. PMC 1376951. PMID 9497254.
  • Huizing M, Anikster Y, Fitzpatrick DL, et al. (2001). "Hermansky-Pudlak Syndrome Type 3 in Ashkenazi Jews and Other Non–Puerto Rican Patients with Hypopigmentation and Platelet Storage-Pool Deficiency". Am. J. Hum. Genet. 69 (5): 1022–32. doi:10.1086/324168. PMC 1274349. PMID 11590544.
  • Suzuki T, Li W, Zhang Q, et al. (2002). "The gene mutated in cocoa mice, carrying a defect of organelle biogenesis, is a homologue of the human Hermansky-Pudlak syndrome-3 gene". Genomics. 78 (1–2): 30–7. doi:10.1006/geno.2001.6644. PMID 11707070.
  • Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. doi:10.1073/pnas.242603899. PMC 139241. PMID 12477932.
  • Nazarian R, Falcón-Pérez JM, Dell'Angelica EC (2003). "Biogenesis of lysosome-related organelles complex 3 (BLOC-3): A complex containing the Hermansky–Pudlak syndrome (HPS) proteins HPS1 and HPS4". Proc. Natl. Acad. Sci. U.S.A. 100 (15): 8770–5. doi:10.1073/pnas.1532040100. PMC 166388. PMID 12847290.
  • Ota T, Suzuki Y, Nishikawa T, et al. (2004). "Complete sequencing and characterization of 21,243 full-length human cDNAs". Nat. Genet. 36 (1): 40–5. doi:10.1038/ng1285. PMID 14702039.
  • Di Pietro SM, Falcón-Pérez JM, Dell'Angelica EC (2004). "Characterization of BLOC-2, a complex containing the Hermansky-Pudlak syndrome proteins HPS3, HPS5 and HPS6". Traffic. 5 (4): 276–83. doi:10.1111/j.1600-0854.2004.0171.x. PMID 15030569.
  • Gerhard DS, Wagner L, Feingold EA, et al. (2004). "The Status, Quality, and Expansion of the NIH Full-Length cDNA Project: The Mammalian Gene Collection (MGC)". Genome Res. 14 (10B): 2121–7. doi:10.1101/gr.2596504. PMC 528928. PMID 15489334.
  • Boissy RE, Richmond B, Huizing M, et al. (2005). "Melanocyte-Specific Proteins Are Aberrantly Trafficked in Melanocytes of Hermansky-Pudlak Syndrome-Type 3". Am. J. Pathol. 166 (1): 231–40. doi:10.1016/S0002-9440(10)62247-X. PMC 1602298. PMID 15632015.
  • Helip-Wooley A, Westbroek W, Dorward H, et al. (2006). "Association of the Hermansky-Pudlak syndrome type-3 protein with clathrin". BMC Cell Biol. 6: 33. doi:10.1186/1471-2121-6-33. PMC 1249560. PMID 16159387.
  • Huizing M, Parkes JM, Helip-Wooley A, et al. (2007). "Platelet alpha granules in BLOC-2 and BLOC-3 subtypes of Hermansky-Pudlak syndrome". Platelets. 18 (2): 150–7. doi:10.1080/13576500600936039. PMID 17365864.


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