CIB1

CIB1
Available structures
PDB	Ortholog search: PDBe RCSB
List of PDB id codes
	1DGU, 1DGV, 1XO5, 1Y1A, 2L4H, 2L4I, 2LM5
Identifiers
Aliases	CIB1, CIB, CIBP, KIP1, PRKDCIP, SIP2-28, calcium and integrin binding 1
External IDs	MGI: 1344418 HomoloGene: 4654 GeneCards: CIB1
Gene location (Human)
Chr.	Chromosome 15 (human)[1]
End	90,234,047 bp[1]
Gene location (Mouse)
Chr.	Chromosome 7 (mouse)[2]
End	80,232,813 bp[2]
RNA expression pattern
	More reference expression data
Gene ontology
Molecular function	• protein serine/threonine kinase inhibitor activity; • calcium ion binding; • protein membrane anchor; • ion channel binding; • Ras GTPase binding; • metal ion binding; • protein C-terminus binding; • protein binding; • calcium-dependent protein kinase inhibitor activity; • protein kinase binding;
Cellular component	• cytoplasm; • vesicle; • Golgi apparatus; • cell projection; • centrosome; • membrane; • growth cone; • plasma membrane; • nucleoplasm; • microtubule organizing center; • ruffle membrane; • axon; • filopodium tip; • dendrite; • neuronal cell body; • apical plasma membrane; • endoplasmic reticulum; • perinuclear region of cytoplasm; • neuron projection; • sarcolemma; • extracellular exosome; • cytoskeleton; • cell nucleus; • cell periphery; • lamellipodium;
Biological process	• negative regulation of protein phosphorylation; • positive regulation of protein targeting to membrane; • thrombopoietin-mediated signaling pathway; • negative regulation of protein kinase B signaling; • cell differentiation; • cellular response to nerve growth factor stimulus; • positive regulation of protein phosphorylation; • negative regulation of neuron projection development; • regulation of cell division; • positive regulation of cell migration involved in sprouting angiogenesis; • extrinsic apoptotic signaling pathway; • positive regulation of cell-matrix adhesion; • positive regulation of cell migration; • cellular response to growth factor stimulus; • cellular response to tumor necrosis factor; • platelet formation; • negative regulation of apoptotic process; • negative regulation of megakaryocyte differentiation; • positive regulation of protein serine/threonine kinase activity; • positive regulation of calcineurin-NFAT signaling cascade; • cell division; • cellular response to DNA damage stimulus; • negative regulation of microtubule depolymerization; • positive regulation of substrate adhesion-dependent cell spreading; • positive regulation of cell growth; • response to ischemia; • cell adhesion; • regulation of cell proliferation; • positive regulation of NF-kappaB transcription factor activity; • double-strand break repair; • angiogenesis; • spermatogenesis; • positive regulation of cell proliferation; • spermatid development; • positive regulation of ERK1 and ERK2 cascade; • cytoplasmic microtubule organization; • endomitotic cell cycle; • cell cycle; • positive regulation of cell adhesion mediated by integrin; • positive regulation of male germ cell proliferation; • negative regulation of cell proliferation; • apoptotic process; • positive regulation of catalytic activity; • negative regulation of protein kinase activity; • negative regulation of protein serine/threonine kinase activity; • positive regulation of protein localization to plasma membrane;
	Sources:Amigo / QuickGO
Orthologs
	10519
	23991
	ENSG00000185043
	ENSMUSG00000030538
	Q99828
	Q9Z0F4
	NM_001277764; NM_006384
	NM_001291275; NM_001291276; NM_011870
	NP_001264693; NP_006375
	NP_001278204; NP_001278205; NP_036000
	Wikidata
View/Edit Human	View/Edit Mouse

Calcium and integrin-binding protein 1 is a protein that in humans is encoded by the CIB1 gene.^[5]^[6]^[7]

The protein encoded by this gene is a member of the calcium-binding protein family. The specific function of this protein has not yet been determined; however this protein is known to interact with DNA-dependent protein kinase and may play a role in kinase-phosphatase regulation of DNA end-joining. This protein also interacts with integrin alpha(IIb)beta(3), which may implicate this protein as a regulatory molecule for alpha(IIb)beta(3).^[7]

Interactions

CIB1 has been shown to interact with RAC3,^[8] PSEN2,^[9] DNA-PKcs,^[10] UBR5^[11] and CD61.^[5]

References

1 2 3 GRCh38: Ensembl release 89: ENSG00000185043 - Ensembl, May 2017
1 2 3 GRCm38: Ensembl release 89: ENSMUSG00000030538 - Ensembl, May 2017
↑ "Human PubMed Reference:".
↑ "Mouse PubMed Reference:".
1 2 Naik UP, Patel PM, Parise LV (Apr 1997). "Identification of a novel calcium-binding protein that interacts with the integrin alphaIIb cytoplasmic domain". J Biol Chem. 272 (8): 4651–4. doi:10.1074/jbc.272.8.4651. PMID 9030514.
↑ Hattori A, Seki N, Hayashi A, Kozuma S, Saito T (Aug 2000). "Genomic structure of mouse and human genes for DNA-PKcs interacting protein (KIP)". DNA Seq. 10 (6): 415–8. doi:10.3109/10425170009015612. PMID 10826701.
1 2 "Entrez Gene: CIB1 calcium and integrin binding 1 (calmyrin)".
↑ Haataja, Leena; Kaartinen Vesa; Groffen John; Heisterkamp Nora (Mar 2002). "The small GTPase Rac3 interacts with the integrin-binding protein CIB and promotes integrin alpha(IIb)beta(3)-mediated adhesion and spreading". J. Biol. Chem. United States. 277 (10): 8321–8. doi:10.1074/jbc.M105363200. ISSN 0021-9258. PMID 11756406.
↑ Stabler, S M; Ostrowski L L; Janicki S M; Monteiro M J (Jun 1999). "A myristoylated calcium-binding protein that preferentially interacts with the Alzheimer's disease presenilin 2 protein". J. Cell Biol. UNITED STATES. 145 (6): 1277–92. doi:10.1083/jcb.145.6.1277. ISSN 0021-9525. PMC 2133148. PMID 10366599.
↑ Wu, X; Lieber M R (Oct 1997). "Interaction between DNA-dependent protein kinase and a novel protein, KIP". Mutat. Res. NETHERLANDS. 385 (1): 13–20. doi:10.1016/s0921-8777(97)00035-9. ISSN 0027-5107. PMID 9372844.
↑ Henderson, Michelle J; Russell Amanda J; Hird Samantha; Muñoz Marcia; Clancy Jennifer L; Lehrbach Gillian M; Calanni Sophina T; Jans David A; Sutherland Robert L; Watts Colin K W (Jul 2002). "EDD, the human hyperplastic discs protein, has a role in progesterone receptor coactivation and potential involvement in DNA damage response". J. Biol. Chem. United States. 277 (29): 26468–78. doi:10.1074/jbc.M203527200. ISSN 0021-9258. PMID 12011095.

External links

Human CIB1 genome location and CIB1 gene details page in the UCSC Genome Browser.

Wu X, Lieber MR (1997). "Interaction between DNA-dependent protein kinase and a novel protein, KIP". Mutat. Res. 385 (1): 13–20. doi:10.1016/s0921-8777(97)00035-9. PMID 9372844.
Seki N, Hayashi A, Abe M, et al. (1999). "Chromosomal assignment of the gene for human DNA-PKcs interacting protein (KIP) on chromosome 15q25.3-q26.1 by somatic hybrid analysis and fluorescence in situ hybridization". J. Hum. Genet. 43 (4): 275–7. doi:10.1007/s100380050089. PMID 9852683.
Stabler SM, Ostrowski LL, Janicki SM, Monteiro MJ (1999). "A myristoylated calcium-binding protein that preferentially interacts with the Alzheimer's disease presenilin 2 protein". J. Cell Biol. 145 (6): 1277–92. doi:10.1083/jcb.145.6.1277. PMC 2133148. PMID 10366599.
Kauselmann G, Weiler M, Wulff P, et al. (1999). "The polo-like protein kinases Fnk and Snk associate with a Ca(2+)- and integrin-binding protein and are regulated dynamically with synaptic plasticity". EMBO J. 18 (20): 5528–39. doi:10.1093/emboj/18.20.5528. PMC 1171621. PMID 10523297.
Hwang PM, Vogel HJ (2000). "Structures of the platelet calcium- and integrin-binding protein and the alphaIIb-integrin cytoplasmic domain suggest a mechanism for calcium-regulated recognition; homology modelling and NMR studies". J. Mol. Recognit. 13 (2): 83–92. doi:10.1002/(SICI)1099-1352(200003/04)13:2<83::AID-JMR491>3.0.CO;2-A. PMID 10822252.
Holtrich U, Wolf G, Yuan J, et al. (2000). "Adhesion induced expression of the serine/threonine kinase Fnk in human macrophages". Oncogene. 19 (42): 4832–9. doi:10.1038/sj.onc.1203845. PMID 11039900.
Haataja L, Kaartinen V, Groffen J, Heisterkamp N (2002). "The small GTPase Rac3 interacts with the integrin-binding protein CIB and promotes integrin alpha(IIb)beta(3)-mediated adhesion and spreading". J. Biol. Chem. 277 (10): 8321–8. doi:10.1074/jbc.M105363200. PMID 11756406.
Whitehouse C, Chambers J, Howe K, et al. (2002). "NBR1 interacts with fasciculation and elongation protein zeta-1 (FEZ1) and calcium and integrin binding protein (CIB) and shows developmentally restricted expression in the neural tube". Eur. J. Biochem. 269 (2): 538–45. doi:10.1046/j.0014-2956.2001.02681.x. PMID 11856312.
Hollenbach AD, McPherson CJ, Lagutina I, Grosveld G (2002). "The EF-hand calcium-binding protein calmyrin inhibits the transcriptional and DNA-binding activity of Pax3". Biochim. Biophys. Acta. 1574 (3): 321–8. doi:10.1016/s0167-4781(02)00230-0. PMID 11997098.
Henderson MJ, Russell AJ, Hird S, et al. (2002). "EDD, the human hyperplastic discs protein, has a role in progesterone receptor coactivation and potential involvement in DNA damage response" (PDF). J. Biol. Chem. 277 (29): 26468–78. doi:10.1074/jbc.M203527200. PMID 12011095.
Barry WT, Boudignon-Proudhon C, Shock DD, et al. (2002). "Molecular basis of CIB binding to the integrin alpha IIb cytoplasmic domain". J. Biol. Chem. 277 (32): 28877–83. doi:10.1074/jbc.M202983200. PMID 12023286.
Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. Bibcode:2002PNAS...9916899M. doi:10.1073/pnas.242603899. PMC 139241. PMID 12477932.
Ma S, Liu MA, Yuan YL, Erikson RL (2003). "The serum-inducible protein kinase Snk is a G1 phase polo-like kinase that is inhibited by the calcium- and integrin-binding protein CIB". Mol. Cancer Res. 1 (5): 376–84. PMID 12651910.
Naik UP, Naik MU (2003). "Association of CIB with GPIIb/IIIa during outside-in signaling is required for platelet spreading on fibrinogen". Blood. 102 (4): 1355–62. doi:10.1182/blood-2003-02-0591. PMID 12714504.
Naik MU, Naik UP (2004). "Calcium-and integrin-binding protein regulates focal adhesion kinase activity during platelet spreading on immobilized fibrinogen". Blood. 102 (10): 3629–36. doi:10.1182/blood-2003-05-1703. PMID 12881299.
Yamniuk AP, Nguyen LT, Hoang TT, Vogel HJ (2004). "Metal ion binding properties and conformational states of calcium- and integrin-binding protein". Biochemistry. 43 (9): 2558–68. doi:10.1021/bi035432b. PMID 14992593.
Lee GE, Yu EY, Cho CH, et al. (2004). "DNA-protein kinase catalytic subunit-interacting protein KIP binds telomerase by interacting with human telomerase reverse transcriptase". J. Biol. Chem. 279 (33): 34750–5. doi:10.1074/jbc.M401843200. PMID 15190070.
Lehner B, Sanderson CM (2004). "A protein interaction framework for human mRNA degradation". Genome Res. 14 (7): 1315–23. doi:10.1101/gr.2122004. PMC 442147. PMID 15231747.

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[refGRCh38Ensembl-1] 1 2 3 GRCh38: Ensembl release 89: ENSG00000185043 - Ensembl, May 2017

[refGRCm38Ensembl-2] 1 2 3 GRCm38: Ensembl release 89: ENSMUSG00000030538 - Ensembl, May 2017

[3] "Human PubMed Reference:".

[4] "Mouse PubMed Reference:".

[pmid9030514-5] 1 2 Naik UP, Patel PM, Parise LV (Apr 1997). "Identification of a novel calcium-binding protein that interacts with the integrin alphaIIb cytoplasmic domain". J Biol Chem. 272 (8): 4651–4. doi:10.1074/jbc.272.8.4651. PMID 9030514.

[pmid10826701-6] Hattori A, Seki N, Hayashi A, Kozuma S, Saito T (Aug 2000). "Genomic structure of mouse and human genes for DNA-PKcs interacting protein (KIP)". DNA Seq. 10 (6): 415–8. doi:10.3109/10425170009015612. PMID 10826701.

[entrez-7] 1 2 "Entrez Gene: CIB1 calcium and integrin binding 1 (calmyrin)".

[pmid11756406-8] Haataja, Leena; Kaartinen Vesa; Groffen John; Heisterkamp Nora (Mar 2002). "The small GTPase Rac3 interacts with the integrin-binding protein CIB and promotes integrin alpha(IIb)beta(3)-mediated adhesion and spreading". J. Biol. Chem. United States. 277 (10): 8321–8. doi:10.1074/jbc.M105363200. ISSN 0021-9258. PMID 11756406.

[pmid10366599-9] Stabler, S M; Ostrowski L L; Janicki S M; Monteiro M J (Jun 1999). "A myristoylated calcium-binding protein that preferentially interacts with the Alzheimer's disease presenilin 2 protein". J. Cell Biol. UNITED STATES. 145 (6): 1277–92. doi:10.1083/jcb.145.6.1277. ISSN 0021-9525. PMC 2133148. PMID 10366599.

[pmid9372844-10] Wu, X; Lieber M R (Oct 1997). "Interaction between DNA-dependent protein kinase and a novel protein, KIP". Mutat. Res. NETHERLANDS. 385 (1): 13–20. doi:10.1016/s0921-8777(97)00035-9. ISSN 0027-5107. PMID 9372844.

[pmid12011095-11] Henderson, Michelle J; Russell Amanda J; Hird Samantha; Muñoz Marcia; Clancy Jennifer L; Lehrbach Gillian M; Calanni Sophina T; Jans David A; Sutherland Robert L; Watts Colin K W (Jul 2002). "EDD, the human hyperplastic discs protein, has a role in progesterone receptor coactivation and potential involvement in DNA damage response". J. Biol. Chem. United States. 277 (29): 26468–78. doi:10.1074/jbc.M203527200. ISSN 0021-9258. PMID 12011095.

CIB1

Interactions

References

External links

Further reading