C0343 RNA

C0343 RNA
Type: Gene; sRNA;
2° structure: Predicted; PFOLD
Seed alignment: Hershberg R
Avg length: 74.80 nucleotides
Avg identity: 88.00%

The C0343 RNA is a bacterial non-coding RNA of 74 nucleotides in length that is found between the ydaN and dbpA genes in the genomes of Escherichia coli and Shigella flexneri, Salmonella enterica and Salmonella typhimurium. This ncRNA was originally identified in E.coli using high-density oligonucleotide probe arrays (microarray).[1] The function of this ncRNA is unknown.

FnrS RNA was later found to be transcribed from the same intergenic region as C0343 RNA.[2]

See also

References

  1. ↑ Tjaden B, Saxena RM, Stolyar S, Haynor DR, Kolker E, Rosenow C (2002). "Transcriptome analysis of Escherichia coli using high-density oligonucleotide probe arrays". Nucleic Acids Res. 30 (17): 3732–8. doi:10.1093/nar/gkf505. PMC 137427. PMID 12202758.
  2. ↑ Durand S, Storz G (March 2010). "Reprogramming of anaerobic metabolism by the FnrS small RNA". Mol. Microbiol. 75 (5): 1215–31. doi:10.1111/j.1365-2958.2010.07044.x. PMC 2941437. PMID 20070527. Retrieved 2010-08-04.


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