List of haplotype estimation and genotype imputation software
This is a list of notable software for haplotype estimation and genotype imputation.
Alphabetical order:
- AlphaImpute
- Beagle
- cnF2freq
- DAGPHASE
- Eagle
- fastPHASE
- FILLIN (part of TASSEL)
- FImpute
- findhap
- FSFHap (part of TASSEL)
- HAPI-UR
- IMPUTE2
- LDMIP
- LinkImpute
- LinkImputeR
- MACH
- PHASE
- PlantImpute
- SHAPEIT
- SimWalk2
- SNPHAP
- STITCH
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